I assume that the advisory you received is just that, an advisory, ie a 'virus' was found in one of the files on the CD, rather than in running process...
I'm no expert, but it seems to me you shouldn't really need to disable your AV to do this
you should be able to copy ALL the files without problem, just so long as you don't run anything
once you've got everything in a (quarantine) folder, rescan it and you should expect your AV software will do it's thing and delete/clean/whatever any nasties that may be lurking (it may well be worthwhile checking with a couple of alternative scanners though, just to be sure)